Model Comparison and Uncertainty Quantification in Tumor Growth

Autores

  • Emanuelle Arantes Paixão Laboratório Nacional de Computação Científica
  • Gustavo Taiji Naozuka Laboratório Nacional de Computação Científica https://orcid.org/0000-0002-7331-9763
  • João Vitor Oliveira Silva Laboratório Nacional de Computação Científica
  • Maurício Pessoa da Cunha Menezes Laboratório Nacional de Computação Científica
  • Regina Cerqueira Almeida Laboratório Nacional de Computação Científica

DOI:

https://doi.org/10.5540/tcam.2021.022.03.00495

Palavras-chave:

Predictive oncology, Inverse problem, Allee effect, Logistic model, Gompertz model, Exponential model

Resumo

Mathematical and computational modeling have been increasingly applied in many areas of cancer research, aiming to improve the understanding of tumorigenic mechanisms and to suggest more effective therapy protocols. The mathematical description of the tumor growth dynamics is often made using the exponential, logistic and Gompertz models. However, recent literature has suggested that the Allee effect may play an important role in the early stages of tumor dynamics, including cancer relapse and metastasis. This work investigates four distinct models with different complexities, which encompasses the exponential, logistic, Gompertz and weak and strong Allee effects dynamics. Using tumor growth data published in the literature, we focus on model selection following a wider approach. Specifically, we perform a sensitivity analysis, apply a Bayesian framework for parameter inference, evaluate the associated sensitivity matrices, and use different information criteria for model selection (Akaike Information Criterion (AIC), Bayesian Information Criterion (BIC), among others). We show that such a wider methodology allows having a more detailed picture of each model assumption and uncertainty, calibration reliability, ultimately improving tumor mathematical description. The used in vivo data revealed no evidence of the Allee effect in the growth dynamics.

Biografia do Autor

Gustavo Taiji Naozuka, Laboratório Nacional de Computação Científica

Possui graduação em Ciência da Computação pela Universidade Estadual de Londrina (UEL) e Mestrado pelo Programa de Pós-graduação em Ciência da Computação (PPCC) na UEL, trabalhando em conjunto com o Programa de Pós-graduação em Matemática Aplicada e Comṕutacional (PGMAC) na mesma universidade. Possui experiência na área de Matemática Aplicada e Computacional e Computação Gráfica, com ênfase em Modelagem e Simulação de Equações Diferenciais, atuando principalmente nos seguintes temas: equação de transporte, geração e análise de qualidade de malhas e sistema de coordenadas generalizadas. Atualmente, é Doutorando pelo Programa de Pós-Graduação de Modelagem Computacional no Laboratório Nacional de Computação Científica (LNCC) e está interessado nos seguintes tópicos: modelagem do crescimento tumoral, controle ótimo, análise de sensibilidade, calibração e seleção de modelos.

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Publicado

2021-09-02

Como Citar

Paixão, E. A., Naozuka, G. T., Silva, J. V. O., Menezes, M. P. da C., & Almeida, R. C. (2021). Model Comparison and Uncertainty Quantification in Tumor Growth. Trends in Computational and Applied Mathematics, 22(3), 495–514. https://doi.org/10.5540/tcam.2021.022.03.00495

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